Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

Walhout Lab web page:
walhoutlab.umassmed.edu

Email for WormFlux:
lutfu.yilmaz@umassmed.edu

Citation

If you use WormFlux in a published work please cite:

• Yilmaz, L.S. and Walhout, A.J.M. (2016) "A Caenorhabditis elegans Genome-Scale Metabolic Network Model", Cell Systems, 5:297-311.

If you use iCEL1314 in a published work please cite:

• Yilmaz, L.S.,Li, X, et al. (2020) "Modeling tissue-relevant Caenorhabditis elegans metabolism at network, pathway, reaction, and metabolite levels", Mol Syst Biol, 16:e9649.

If you use WormPaths or Pathway Enrichment Analysis tool (PEA) in a published work please cite:

• Walker, M.D.,Giese, G.E., Holdorf, A.D. et al. (2020) "WormPaths: Caenorhabditis elegans metabolic pathway annotation and visualization", Genetics, doi: 10.1093/genetics/iyab089.

The information and tools provided in this website are to be used for academic purposes only. Potential users of the flux analysis tools (grey buttons in the vertical menu) are asked to show proof of working at an academic institution during the creation of their accounts. These mathematical tools are powered by the commercial software Gurobi.